Wilkinson, T. A., T. L. Tellinghuisen, R. J. Kuhn and C. B. Post. 2005. Association of Sindbis Virus Capsid Protein with Phospholipid Membranes and the E2 Glycoprotein: Implications for Alphavirus Assembly. Biochemistry. 2005 Mar 1;44(8):2800-10.

Mukhopadhyay, S., R. J. Kuhn and M. G. Rossmann. 2005. A structural perspective of the flavivirus lifecycle. Nat Rev Microbiol. 2005 Jan;3(1):13-22. Review.

Zhang, W., M. Heil, R. J. Kuhn and T. S. Baker. 2005. Heparin binding sites on Ross River Virus revealed by electron cryo-microscopy. Virology 332:511-518.

Jones, C. T., C. G. Patkar and R. J. Kuhn. 2005. Construction and applications of yellow fever virus replicons. Virology 331:247-259.

Kuhn, R. J. and M. G. Rossmann. 2005. Structure and assembly of icosahedral enveloped RNA viruses. In: Advances in Virus Research. Roy, P. (ed.) Academic Press.

Choi, K. H., J. M. Groarke, D. C. Young, M. G. Rossmann, D. C. Pevear, R. J. Kuhn and J. L. Smith. 2004. Design, expression, and purification of a Flaviviridae polymerase using a high-throughput approach to facilitate crystal structure determination. Protein Science 13:2685-2692.

Choi, K. H., J. M. Groarke, D. C. Young, R. J. Kuhn, J. L. Smith, D. C. Pevear and M. G. Rossmann.. 2004. The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation. Proc. Natl. Acad. Sci. USA 101:4425-4430.

Zhang, Y., W. Zhang, S. Ogata, D. Clements, J. H. Strauss, T. S. Baker, R. J. Kuhn and M. G. Rossmann. 2004. Conformational changes of the flavivirus E glycoprotein. Structure 12:1607-1618.

Ma, L., C. T. Jones, T. D. Groesch, R. J. Kuhn and C. B. Post 2004. Solution structure of dengue virus capsid protein reveals another fold. Proc. Natl. Acad. Sci. USA 101:3414-3419.

Linger, B. R., L. Kunovska, R. J. Kuhn and B. L. Golden. 2004 Sindbis virus nucleocapsid assembly: RNA folding promotes capsid protein dimerization. RNA 10:128-138.

Menon, E. L., R. Perera, M. Navarro, R. J. Kuhn and H. Morrison. 2004. Phototoxicity against tumor cells and sindbis virus by an octahedral rhodium bisbipyridyl complex and evidence for the genome as a target in viral photoinactivation. Inorg. Chem. 43:5373-5381.

Kuhn, R. J. and J. H. Strauss. 2003. Enveloped Viruses. Pp. 363-377. In: Virus Structures. Chiu, W. and Johnson, J. E. (eds.) Advances in Protein Chemistry (Vol. 64). Academic Press.

Mukhopadhyay, S., B-S. Kim, P. R. Chipman, M. G. Rossmann and R. J. Kuhn. 2003. Structure of West Nile virus. Science 302:248.

Menon, E. L., R. Perera, R. J. Kuhn and H. Morrison. 2003 Reactive oxygen species formation by UVA irradiation of urocanic acid and the role of trace metals in this chemistry Photochemistry and Photobiology 78:567-575.

Zhang, W., P. R. Chipman, J. Corver, P. R. Johnson, Y. Zhang, S. Mukhopadhyay, T. S. Baker, J. H. Strauss, M. G. Rossmann and R. J. Kuhn. 2003 Visualization of membrane protein domains by cryo-electron microscopy of dengue virus Nat. Struct. Biol. 10:907-912.

Perera, R., C. Navaratnarajah and R. J. Kuhn. 2003. A heterologous coiled coil can substitute for helix I of the Sindbis virus capsid protein J. Virol: 77:8345-8353.

Zhang, Y., J. Corver, P. R. Chipman, W. Zhang, S. V. Pletnev, D. Sedlak, T. S. Baker, J. H. Strauss, R. J. Kuhn and M. G. Rossmann. 2003. Structures of immature flavivirus particles EMBO J. 22:2604-2613.

Jones, C. T., L. Ma, J. W. Burgner, T. D. Groesch, C. B. Post, R. J. Kuhn. 2003. Flavivirus capsid protein is a dimeric alpha-helical protein. J. Virol: 77:7143-7149.

He, Y., S. Mueller, P. R. Chipman, C. M. Bator, X. Peng, V. D. Bowman, S. Mukhopadyay, E. Wimmer, R. J. Kuhn, and M. G. Rossmann. 2003. Complexes of poliovirus serotypes with their common cellular receptor, PVR. J. Virol: 77:4827-4835.

Zhang, W., S. Mukhopadhyay, S. V. Pletnev, T. S. Baker, R. J. Kuhn and M. G. Rossmann. 2002. Placement of the structural proteins in Sindbis virus. J. Virol. 76:11645-11658.

Mukhopadhyay, S., P. R. Chipman, E. M. Hong, R. J. Kuhn and M. G. Rossmann. 2002. In vitro assembled alphavirus core-like particles maintain a structure similar to nucleocapsid cores in mature virus. J. Virol: 76:11128-11132.

Rossmann, M. G., Y. He and R. J. Kuhn. 2002. Picornavirus-receptor interactions. Trends in Microbiology 10:324-331.

He, Y., F. Lin, P. R. Chipman, C. M. Bator, T. S. Baker, M. Shoham, R. J. Kuhn, M. E. Medof and M. G. Rossmann. 2002. Structure of decay-accelerating factor bound to echovirus 7: a virus-receptor complex. Proc. Natl. Acad. Sci. USA 99:10325-10329.

Zhang, W., B. R. Fisher, N. H. Olson, J. H. Strauss, R. J. Kuhn. and T. S. Baker. 2002. Aura virus structure suggests that the T_4 organization is a fundamental property of viral structural proteins. J. Virol: 76:7239-7246.

Kuhn, R. J. and M. G. Rossmann. 2002. Interaction of major group rhinoviruses with their cellular receptor, ICAM-1 pp. 85-91. In: Molecular Biology of Picornaviruses, Semler, B. L. and Wimmer, E. (eds.) ASM Press.

Kuhn, R. J., W. Zhang, M. G. Rossmann, S. V. Pletnev, J. Corver, E. Lenches, C. T. Jones, S. Mukhopadhyay P. R. Chipman, E. G. Strauss, T. S. Baker and J. H. Strauss. 2002. Structure of dengue virus: implications for flavivirus organization, maturation, and fusion. Cell 108:717-725.

Rieder, E., A. E. Gorbalenya, C. Xiao, Y. He, T. S. Baker, R. J. Kuhn, M. G. Rossmann and E. Wimmer. 2001. Will the polio niche remain vacant? In: Progress in Polio Eradication: Vaccine Strategies for the End Game. Brown, F. (ed.) Dev. Biol. 105:111-112.

He, Y., P. R. Chipman, J. Howitt, C. M. Bator, M. A. Whitt, T. S. Baker, R. J. Kuhn, C. W. Anderson, P. Freimuth, P. and M. G. Rossmann. 2001. Interaction of coxsackievirus B3 with the full-length coxsackievirus-adenovirus receptor. Nature Struct Biol. 8:874-878.

Heil, M., A. Albee, J. H. Strauss and R. J. Kuhn. 2001. An amino acid substitution in the coding region of the E2 glycoprotein adapts Ross River Virus to utilize Heparan Sulfate as an attachment moiety J. Virol. 75:6303-6309.

Pletnev, S. V., W. Zhang, S. Mukhopadhyay, B. R. Fisher, R. Hernandez, D. T. Brown, T. S. Baker, M. G. Rossmann and R. J. Kuhn. 2001. Locations of carbohydrate sites on alphavirus glycoproteins show that E1 forms an icosahedral scaffold Cell 105:127-136.

Tellinghuisen, T. L., R. Perera and R. J. Kuhn. 2001. Genetic and biochemical studies on the assembly of an enveloped virus. In: Genetic Engineering, Principles and Methods, Vol. 23, Setlow, J. K. (ed.) pp. 83-112.

Tellinghuisen, T. L., R. Perera and R. J. Kuhn. 2001. In vitro assembly of Sindbis nucleocapsid-like particles from cross-linked dimers of truncated and mutant capsid proteins J. Virol. 75:2810-2817.

Sharkey, C. M., C. L. North, R. J. Kuhn and D. A. Sanders. 2001. Ross River virus glycoprotein-pseudotyped retroviruses and stable cell lines for their production J. Virol. 75:2653-2659.

Xiao, C., C. M. Bator, V. D. Bowman, E. Rieder, Y. He, B. Hebert, J. Bella, T. S. Baker, E. Wimmer, R. J. Kuhn and M. G. Rossmann. 2001. Interaction of coxsackievirus A21 with its cellular receptor, ICAM-1 J. Virol. 75:2444-2451.

Perera, R., K. E. Owen, T. L. Tellinghuisen, A. E. Gorbalenya and R. J. Kuhn. 2001. Alphavirus nucleocapsid protein contains a putative coiled coil α-helix important for core assembly J. Virol. 75:1-10.

Rossmann, M. G., J. Bella, P. R. Kolatkar, Y. He, E. Wimmer, R. J. Kuhn and T. S. Baker. 2000. Cell recognition and entry by rhino- and enteroviruses Virology 269:239-247.

Tellinghuisen, T. L. and R. J. Kuhn. 2000. Nucleic acid-dependent crosslinking of the nucleocapsid protein of Sindbis virus J. Virol. 74:4302-4309.

Houghtaling, M. A., R. Perera, K. E. Owen, S. Wagner, R. J. Kuhn and H. Morrison. 2000. Photobiological properties of positively charged methylene violet analogs. Photochemistry & Photobiology. 71(1):20-28.

He, Y., V. D. Bowman, S. Mueller, C. M. Bator, J. Bella, X. Peng, T. S. Baker, E. Wimmer, R. J. Kuhn and M. G. Rossmann. 2000. Interaction of the poliovirus receptor with poliovirus Proc. Natl. Acad. Sci. USA 97:79-84.

Tellinghuisen, T. L., A. E. Hamburger, B. R. Fisher, R. Ostendorp and R. J. Kuhn. 1999. In vitro assembly of alphavirus cores by using nucleocapsid protein expressed in Escherichia coli. J. Virol. 73:5309-5319.

Lee, S., R. J. Kuhn and M. G. Rossmann. 1998. Probing the potential glycoprotein binding site of Sindbis virus capsid protein with dioxane and model building. Proteins: Structure, Function, and Genetics 33:311-317.

Kuhn, R. J. 1997. Identification and biology of cellular receptors for the CVB group, pp. 209-226. In The Coxsackie B Viruses, Tracy, S., Chapman, N. M. and Mahy, B. W. J. (eds.), Springer Verlag, Vienna, Austria.

Owen, K. E. and R. J. Kuhn. 1997. Alphavirus budding is dependent on the interaction between the nucleocapsid and hydrophobic amino acids on the cytoplasmic domain of the E2 envelope glycoprotein. Virology 230:187-196.

Zhao, R., D. C. Pevear, M. J. Kremer, V. L. Giranda, J. A. Kofron, R. J. Kuhn and M. G. Rossmann. 1996. Human rhinovirus 3 at 3.0 resolution. Structure 4:1205-1220.

Kuhn, R. J., D. E. Griffin, K. E. Owen, H. G. M. Niesters and J. H. Strauss. 1996. Chimeric Sindbis-Ross River viruses to study interactions between alphavirus nonstructural and structural regions. J. Virol. 70:7900-7909.

Choi, H-K., S. Lee, Y-P. Zhang, B. R. McKinney, G. Wengler, M. G. Rossmann and R. J. Kuhn. 1996. Structural analysis of Sindbis virus capsid mutants involving assembly and catalysis. J. Mol. Biol. 262:151-167.

Lee, S., K. E. Owen, H-K. Choi, H. Lee, G. Lu, G. Wengler, D. T. Brown, M. G. Rossmann and R. J. Kuhn. 1996. Identification of a protein binding site on the surface of the alphavirus nucleocapsid protein and its implication in virus assembly. Structure 4:531-541.

Owen, K. E. and R. J. Kuhn. 1996. Identification of a region in the Sindbis virus nucleocapsid protein that is involved in specificity of RNA encapsidation. J. Virol. 70:2757-2763.

Kuhn, R. J. and M. G. Rossmann. 1995. When it's better to lie low, In News and Views, Nature 375:275-276.

Smith, T. J., R. H. Cheng, N. H. Olson, P. Peterson, E. Chase, R. J. Kuhn and T. S. Baker. 1995. Putative receptor binding sites on alphaviruses as visualized by cryo-electron microscopy. Proc. Natl. Acad. Sci. USA 92:10648-10652.

Strauss, J. H., E. G. Strauss and R. J. Kuhn. 1995. Budding of alphaviruses. Trends in Microbiology 3:346-350.

Cheng, R. H., R. J. Kuhn, N. H. Olson, M. G. Rossmann, H-K. Choi, T. J. Smith and T. S. Baker. 1995. Nucleocapsid and Glycoprotein Organization in an Enveloped Virus. Cell 80:621-630.

Strauss, J.H., T. Rmenapf, R. C. Weir, R. J. Kuhn, K. Wang and E. G. Strauss. 1994. Cellular receptors for alphaviruses, pp. 141-163 In Cellular Receptors for Animal Viruses, Wimmer, E. ed., Cold Spring Harbor Press.

Lopez, S., J. S. Yao, R. J. Kuhn, E. G. Strauss and J. H. Strauss. 1994. Nucleocapsid-glycoprotein interactions required for assembly of alphaviruses. J. Virol. 68:1316-1323.

Strauss, J.H., K. Wang, A.L. Schmaljohn, R. J. Kuhn and E. G. Strauss. 1994. Host-cell receptors for Sindbis virus, pp. 473-484. In Positive Strand RNA Viruses, Brinton, M.A. and Rueckert, R.R. (eds.), Springer Verlag, Vienna, Austria.

Cao, X., R. J. Kuhn and E. Wimmer. 1993. Replication of poliovirus RNA containing two VPg genes leads to deletion of one VPg by recombination. J. Virol. 67:5572-5578.

Tucker, P. C., E. G. Strauss, R. J. Kuhn, J. H. Strauss and D. E. Griffin. 1993. Viral determinants of age-dependent virulence of Sindbis virus for mice. J. Virol. 67:4605-4610.

Kuhn, R. J., D. E. Griffin, H. Zhang, H. G. M. Niesters and J. H. Strauss. 1992. Attenuation of Sindbis virus neurovirulence using defined mutations in the nontranslated regions of the genome RNA. J. Virol. 66:7121-7127.

Wang, K. S., R. J. Kuhn, E. G. Strauss, S. Ou and J. H. Strauss. 1992. High-affinity laminin receptor is a receptor for Sindbis virus in mammalian cells. J. Virol. 66:4992-5001.

Wang, K. S., A. L. Schmaljohn, R. J. Kuhn and J. H. Strauss. 1991. Antiidiotypic antibodies as probes for the Sindbis virus receptor. Virology 181:694-702.

Kuhn, R. J., H. G. M. Niesters, Z. Hong and J. H. Strauss. 1991. Infectious RNA transcripts from Ross River virus cDNA clones and the construction and characterization of defined chimeras with Sindbis virus. Virology 182:430-441.

deGroot, R. J., T. Rmenapf, R. J. Kuhn, E. G. Strauss and J. H. Strauss. 1991. Sindbis virus RNA polymerase is degraded by the N-end rule pathway. Proc. Natl. Acad. Sci. USA 88:8967-8971.

Reuer, Q., R. J. Kuhn and E. Wimmer. 1990. Characterization of poliovirus clones containing lethal and nonlethal mutations in the genome-linked protein VPg. J. Virol. 64:2967-2975.

Strauss, J. H., R. J. Kuhn, H. G. M. Niesters and E. G. Strauss. 1990. Functions of the 5'-terminal and 3'-terminal sequences of the Sindbis virus genome in replication, pp. 61-66. In Brinton, M. A. and F. X. Heinz (eds.), New Aspects of Positive-Strand RNA Viruses. ASM Publications, Washington, DC.

Kuhn, R. J., Z. Hong and J. H. Strauss. 1990. Mutagenesis of the 3' nontranslated region of Sindbis virus RNA. J. Virol. 64:1465-1476.

Bradley, J., M. G. Murray, R. J. Kuhn, H. Tada, X. F. Yang, C. Mirzayan and E. Wimmer. 1989. Use of mutagenesis cartridges in molecular genetic analyses of poliovirus: mutations in the genome-linked protein, VPg and in neutralization antigenic site I, pp. 3-25. In Semler, B. L. and E.Ehrenfeld (eds.), Molecular Aspects of Picornavirus Infection and Detection. ASM Publications, Washington, DC.

Semler, B. L., R. J. Kuhn and E. Wimmer. 1988. Replication of the poliovirus genome, pp. 23-48. In Holland, J. J., P. Alhquist, D. Domingo (eds.), RNA Genetics. CRC Press.

Murray, M. G., R. J. Kuhn and E. Wimmer. 1988. Poliovirus Type 1 and 3 neutralizing antibodies in rabbits, pp. 197-204. In Lerner, R. A., R. M. Chanock, F. Brown, and H. Ginsberg (eds.), Vaccines 88. Cold Spring Harbor Lab, Cold Spring Harbor, NY.

Murray, M. G., R. J. Kuhn, M. Arita, N. Kawamura, A. Nomoto and E. Wimmer. 1988. Poliovirus Type 1/Type 3 antigenic hybrid virus constructed in vitro elicits Type 1 and Type 3 neutralizing antibodies in rabbits and monkeys. Proc. Natl. Acad. Sci. USA 85:3203-3207.

Kuhn, R. J., H. Tada, M. F. Ypma-Wong, B. L. Semler and E. Wimmer. 1988. Mutational analysis of the genome-linked protein of poliovirus. J. Virol. 62:4207-4215.

Kuhn, R. J., H. Tada, M. F. Ypma-Wong, J. J. Dunn, B. L. Semler and E. Wimmer. 1988. Construction of a "mutagenesis cartridge" for poliovirus genome-linked protein: isolation and characterization of viable and nonviable mutants. Proc. Natl. Acad. Sci. USA 85:519-523.

Wimmer, E., R. J. Kuhn, S. Pincus, C-F. Yang, H. Toyoda, M. Nicklin and N. Takeda. 1987. Molecular events leading to picornavirus genome replication, pp. 251-276. 1987. In Davies, J. W., R. Hull, K. F. Chater, T. H. N. Ellis, G. P. Lomonossoff, and H. W. Woolhouse (eds.), Virus Replication and Genome Interactions. 7th John Innes Symposium, Cambridge: Co. of Biologists Ltd.

Pincus, S. E., R. J. Kuhn, C-F. Yang, H. Toyoda, N. Takeda and E. Wimmer. 1987. The poliovirus genome: a unique RNA in structure, gene organization, and replication, pp. 175-220. In Inouye, M. and B. S. Dudock (eds.), Molecular Biology of RNA: New Perspectives. Academic Press.

Takeda, N., C-F. Yang, R. J. Kuhn and E. Wimmer. 1987. Uridylylation of the genome-linked protein of poliovirus is dependent upon an endogenous RNA template. Virus Research 8:193-204.

Paul, A. V., C-F. Yang, S. K. Jang, R. J. Kuhn, H. Tada, M. Nicklin, H. G. Krusslich, C. K. Lee and E. Wimmer. 1987. Molecular events leading to poliovirus genome replication, pp. 343-353. In Cold Spring Harbor Symp. Quant. Biology.

Kuhn, R. J. and E. Wimmer. 1987. The replication of picornaviruses, pp. 17-51. In Rowlands, D., J. M. A. Mayo, and B. W. J. Mahy (eds.), The Molecular Biology of the Positive Strand RNA Viruses. Academic Press.

Kuhn, R. J., E. Wimmer and B. L. Semler. 1987. Expression of the poliovirus genome from infectious cDNA is dependent upon arrangements of eukaryotic and prokaryotic sequences in recombinant plasmids. Virology 157:550-564.

Takeda, N., R. J. Kuhn, C-F. Yang, T. Takegami and E. Wimmer. 1986. Initiation of poliovirus plus strand RNA synthesis in a membrane complex of infected HeLa cells. J. Virol. 60:43-53.

Takegami, T., R. J. Kuhn, C. W. Anderson and E. Wimmer. 1983. Membrane-dependent uridylation of the genome-linked protein VPg of poliovirus. Proc. Natl. Acad. Sci. USA 80:7447-7451.